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LOC104419440 UDP-arabinopyranose mutase 1 [ Eucalyptus grandis ]

Gene ID: 104419440, updated on 7-Dec-2023

Summary

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Gene symbol
LOC104419440
Gene description
UDP-arabinopyranose mutase 1
Locus tag
EUGRSUZ_I02055
Gene type
protein coding
RefSeq status
MODEL
Organism
Eucalyptus grandis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Genomic context

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See LOC104419440 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
4
Annotation release Status Assembly Chr Location
102 current ASM1654582v1 (GCF_016545825.1) 9 NC_052620.1 (33572705..33575702)
101 previous assembly Egrandis1_0 (GCF_000612305.1) Unplaced Scaffold NW_010092446.1 (30316587..30319587)

Chromosome 9 - NC_052620.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104419438 Neighboring gene cytochrome P450 85A Neighboring gene scarecrow-like protein 3 Neighboring gene MYB-like transcription factor EOBII

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-arabinopyranose mutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UDP-L-arabinose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-arabinopyranose mutase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eucalyptus grandis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1654582v1 Primary Assembly

Genomic

  1. NC_052620.1 Reference ASM1654582v1 Primary Assembly

    Range
    33572705..33575702
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010031101.3 → XP_010029403.1  UDP-arabinopyranose mutase 1

    See identical proteins and their annotated locations for XP_010029403.1

    UniProtKB/TrEMBL
    A0A059ARA8
    Conserved Domains (1) summary
    PLN03180
    Location:13 → 355
    PLN03180; reversibly glycosylated polypeptide; Provisional
Nucleotide Protein
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