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LOC104419113 acyltransferase-like protein At3g26840, chloroplastic [ Eucalyptus grandis ]

Gene ID: 104419113, updated on 7-Dec-2023

Summary

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Gene symbol
LOC104419113
Gene description
acyltransferase-like protein At3g26840, chloroplastic
Locus tag
EUGRSUZ_I01613
Gene type
protein coding
RefSeq status
MODEL
Organism
Eucalyptus grandis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Genomic context

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See LOC104419113 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
14
Annotation release Status Assembly Chr Location
102 current ASM1654582v1 (GCF_016545825.1) 9 NC_052620.1 (28409778..28419183)
101 previous assembly Egrandis1_0 (GCF_000612305.1) Unplaced Scaffold NW_010092446.1 (26068391..26077839)

Chromosome 9 - NC_052620.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108955383 Neighboring gene CASP-like protein 1F2 Neighboring gene acyltransferase-like protein At3g26840, chloroplastic Neighboring gene acyltransferase-like protein At3g26840, chloroplastic Neighboring gene acyltransferase-like protein At3g26840, chloroplastic

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acyltransferase-like protein At3g26840, chloroplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eucalyptus grandis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1654582v1 Primary Assembly

Genomic

  1. NC_052620.1 Reference ASM1654582v1 Primary Assembly

    Range
    28409778..28419183
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010030654.3 → XP_010028956.2  acyltransferase-like protein At3g26840, chloroplastic

    UniProtKB/TrEMBL
    A0A059AQ11
    Conserved Domains (2) summary
    cd07987
    Location:453 → 690
    LPLAT_MGAT-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like
    COG0596
    Location:148 → 403
    MhpC; Pimeloyl-ACP methyl ester carboxylesterase [Coenzyme transport and metabolism, General function prediction only]
Nucleotide Protein
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