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TMED6 transmembrane p24 trafficking protein 6 [ Chaetura pelagica (chimney swift) ]

Gene ID: 104398330, updated on 3-Aug-2024

Summary

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Gene symbol
TMED6
Gene description
transmembrane p24 trafficking protein 6
Locus tag
M959_05488
Gene type
protein coding
RefSeq status
MODEL
Organism
Chaetura pelagica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Strisores; Apodiformes; Apodidae; Apodinae; Chaetura
Orthologs
human mouse all
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Genomic context

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See TMED6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ChaPel_1.0 (GCF_000747805.1) Unplaced Scaffold NW_009952441.1 (847185..849041, complement)

NW_009952441.1Genomic Context describing neighboring genes Neighboring gene conserved oligomeric Golgi complex subunit 8-like Neighboring gene nucleolar pre-rRNA processing protein NIP7 Neighboring gene cytochrome b5 type B Neighboring gene telomeric repeat binding factor 2 Neighboring gene nuclear factor of activated T cells 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009952441.1 Unplaced Scaffold Reference ChaPel_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane emp24 domain-containing protein 6
Names
Transmembrane emp24 domain-containing protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chaetura pelagica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChaPel_1.0

Genomic

  1. NW_009952441.1 Reference ChaPel_1.0

    Range
    847185..849041 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010008430.1 → XP_010006732.1  transmembrane emp24 domain-containing protein 6

    See identical proteins and their annotated locations for XP_010006732.1

    Conserved Domains (1) summary
    pfam01105
    Location:37 → 223
    EMP24_GP25L; emp24/gp25L/p24 family/GOLD
Nucleotide Protein
Heading Accession and Version

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