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WASHC4 WASH complex subunit 4 [ Chaetura pelagica (chimney swift) ]

Gene ID: 104396076, updated on 3-Aug-2024

Summary

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Gene symbol
WASHC4
Gene description
WASH complex subunit 4
Locus tag
M959_14035
Gene type
protein coding
RefSeq status
MODEL
Organism
Chaetura pelagica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Strisores; Apodiformes; Apodidae; Apodinae; Chaetura
Also known as
KIAA1033
Orthologs
human mouse all
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Genomic context

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See WASHC4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
33
Annotation release Status Assembly Chr Location
100 current ChaPel_1.0 (GCF_000747805.1) Unplaced Scaffold NW_009969339.1 (3481259..3513649, complement)

NW_009969339.1Genomic Context describing neighboring genes Neighboring gene chromosome unknown open reading frame, human C12orf75 Neighboring gene adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 Neighboring gene aldehyde dehydrogenase 1 family member L2 Neighboring gene NOP protein chaperone 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009969339.1 Unplaced Scaffold Reference ChaPel_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endosomal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of WASH complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WASH complex subunit 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chaetura pelagica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChaPel_1.0

Genomic

  1. NW_009969339.1 Reference ChaPel_1.0

    Range
    3481259..3513649 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010005858.1 → XP_010004160.1  WASH complex subunit 7

    Conserved Domains (3) summary
    pfam14744
    Location:619 → 952
    WASH-7_mid; WASH complex subunit 7
    pfam14745
    Location:39 → 607
    WASH-7_N; WASH complex subunit 7, N-terminal
    pfam14746
    Location:973 → 1142
    WASH-7_C; WASH complex subunit 7, C-terminal
Nucleotide Protein
Heading Accession and Version

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