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ST3GAL5 ST3 beta-galactoside alpha-2,3-sialyltransferase 5 [ Chaetura pelagica (chimney swift) ]

Gene ID: 104391015, updated on 3-Aug-2024

Summary

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Gene symbol
ST3GAL5
Gene description
ST3 beta-galactoside alpha-2,3-sialyltransferase 5
Locus tag
M959_01418
Gene type
protein coding
RefSeq status
MODEL
Organism
Chaetura pelagica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Strisores; Apodiformes; Apodidae; Apodinae; Chaetura
Orthologs
human mouse all
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Genomic context

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See ST3GAL5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current ChaPel_1.0 (GCF_000747805.1) Unplaced Scaffold NW_009953655.1 (347093..355326)

NW_009953655.1Genomic Context describing neighboring genes Neighboring gene pentatricopeptide repeat domain 3 Neighboring gene RNA polymerase I subunit A Neighboring gene fibroblast growth factor receptor like 1 Neighboring gene ring finger protein 212

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009953655.1 Unplaced Scaffold Reference ChaPel_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lactosylceramide alpha-2,3-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactosylceramide alpha-2,3-sialyltransferase
Names
Lactosylceramide alpha-2,3-sialyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chaetura pelagica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChaPel_1.0

Genomic

  1. NW_009953655.1 Reference ChaPel_1.0

    Range
    347093..355326
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010000226.1 → XP_009998528.1  lactosylceramide alpha-2,3-sialyltransferase

    See identical proteins and their annotated locations for XP_009998528.1

    Conserved Domains (1) summary
    pfam00777
    Location:89 → 356
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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