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SUCLG2 succinate-CoA ligase GDP-forming subunit beta [ Chaetura pelagica (chimney swift) ]

Gene ID: 104388085, updated on 3-Aug-2024

Summary

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Gene symbol
SUCLG2
Gene description
succinate-CoA ligase GDP-forming subunit beta
Locus tag
M959_05649
Gene type
protein coding
RefSeq status
MODEL
Organism
Chaetura pelagica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Strisores; Apodiformes; Apodidae; Apodinae; Chaetura
Orthologs
human mouse all
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Genomic context

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See SUCLG2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ChaPel_1.0 (GCF_000747805.1) Unplaced Scaffold NW_009953077.1 (3044263..3138461)

NW_009953077.1Genomic Context describing neighboring genes Neighboring gene TAFA chemokine like family member 4 Neighboring gene TAFA chemokine like family member 1 Neighboring gene monocarboxylate transporter 2-like Neighboring gene kelch repeat and BTB domain containing 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009953077.1 Unplaced Scaffold Reference ChaPel_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables succinate-CoA ligase (GDP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in succinyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of succinate-CoA ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
Names
succinate-CoA ligase GDP-forming beta subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chaetura pelagica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChaPel_1.0

Genomic

  1. NW_009953077.1 Reference ChaPel_1.0

    Range
    3044263..3138461
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009996905.1 → XP_009995207.1  succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial

    Conserved Domains (3) summary
    PRK00696
    Location:2 → 384
    sucC; succinyl-CoA synthetase subunit beta; Provisional
    pfam00549
    Location:258 → 378
    Ligase_CoA; CoA-ligase
    pfam08442
    Location:1 → 199
    ATP-grasp_2; ATP-grasp domain
Nucleotide Protein
Heading Accession and Version

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