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AGXT alanine--glyoxylate and serine--pyruvate aminotransferase [ Chaetura pelagica (chimney swift) ]

Gene ID: 104387930, updated on 18-Sep-2024

Summary

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Gene symbol
AGXT
Gene description
alanine--glyoxylate and serine--pyruvate aminotransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Chaetura pelagica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Strisores; Apodiformes; Apodidae; Apodinae; Chaetura
Orthologs
human mouse all
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Genomic context

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See AGXT in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current ChaPel_1.0 (GCF_000747805.1) Unplaced Scaffold NW_009953064.1 (659473..663367, complement)

NW_009953064.1Genomic Context describing neighboring genes Neighboring gene sushi, nidogen and EGF like domains 1 Neighboring gene mab-21 like 4 Neighboring gene kinesin family member 1A Neighboring gene ILK associated serine/threonine phosphatase Neighboring gene erythroferrone

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009953064.1 Unplaced Scaffold Reference ChaPel_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-serine-pyruvate transaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables alanine-glyoxylate transaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycine biosynthetic process, by transamination of glyoxylate IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine--pyruvate aminotransferase
Names
alanine-glyoxylate aminotransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chaetura pelagica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChaPel_1.0

Genomic

  1. NW_009953064.1 Reference ChaPel_1.0

    Range
    659473..663367 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009996727.1 → XP_009995029.1  serine--pyruvate aminotransferase

    Conserved Domains (2) summary
    cd06451
    Location:23 → 383
    AGAT_like; Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), ...
    COG0075
    Location:20 → 386
    PucG; Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG [Amino acid transport and metabolism, Nucleotide transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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