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PKD1L2 polycystin-1-like protein 2 [ Tauraco erythrolophus (red-crested turaco) ]

Gene ID: 104383824, updated on 3-Aug-2024

Summary

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Gene symbol
PKD1L2
Gene description
polycystin-1-like protein 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Tauraco erythrolophus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Otidimorphae; Musophagiformes; Musophagidae; Tauraco
Orthologs
human all
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Genomic context

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See PKD1L2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
43
Annotation release Status Assembly Chr Location
100 current ASM70936v1 (GCF_000709365.1) Unplaced Scaffold NW_010032899.1 (30825..72611)

NW_010032899.1Genomic Context describing neighboring genes Neighboring gene beta-carotene oxygenase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010032899.1 Unplaced Scaffold Reference ASM70936v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in detection of mechanical stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polycystic kidney disease protein 1-like 2
Names
polycystin 1 like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tauraco erythrolophus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70936v1

Genomic

  1. NW_010032899.1 Reference ASM70936v1

    Range
    30825..72611
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009992119.1 → XP_009990421.1  polycystic kidney disease protein 1-like 2

    Conserved Domains (6) summary
    cd00037
    Location:67 → 184
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    smart00303
    Location:1349 → 1398
    GPS; G-protein-coupled receptor proteolytic site domain
    cd01752
    Location:1461 → 1580
    PLAT_polycystin; PLAT/LH2 domain of polycystin-1 like proteins. Polycystins are a large family of membrane proteins composed of multiple domains, present in fish, invertebrates, mammals, and humans that are widely expressed in various cell types and whose biological ...
    pfam02010
    Location:621 → 920
    REJ; REJ domain
    pfam02140
    Location:200 → 281
    Gal_Lectin; Galactose binding lectin domain
    pfam08016
    Location:2068 → 2488
    PKD_channel; Polycystin cation channel
Nucleotide Protein
Heading Accession and Version

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