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DCN decorin [ Tauraco erythrolophus (red-crested turaco) ]

Gene ID: 104383529, updated on 3-Aug-2024

Summary

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Gene symbol
DCN
Gene description
decorin
Locus tag
N340_08073
Gene type
protein coding
RefSeq status
MODEL
Organism
Tauraco erythrolophus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Otidimorphae; Musophagiformes; Musophagidae; Tauraco
Orthologs
human mouse all
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Genomic context

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See DCN in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current ASM70936v1 (GCF_000709365.1) Unplaced Scaffold NW_010038789.1 (11764..55014)

NW_010038789.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010038789.1 Unplaced Scaffold Reference ASM70936v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
decorin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tauraco erythrolophus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70936v1

Genomic

  1. NW_010038789.1 Reference ASM70936v1

    Range
    11764..55014
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009991712.1 → XP_009990014.1  decorin

    UniProtKB/TrEMBL
    A0A093BZR2
    Conserved Domains (4) summary
    smart00013
    Location:52 → 83
    LRRNT; Leucine rich repeat N-terminal domain
    cd00116
    Location:82 → 279
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00033
    Location:60 → 80
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:82 → 139
    LRR_8; Leucine rich repeat
Nucleotide Protein
Heading Accession and Version

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