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ATRN attractin [ Tauraco erythrolophus (red-crested turaco) ]

Gene ID: 104377163, updated on 3-Aug-2024

Summary

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Gene symbol
ATRN
Gene description
attractin
Locus tag
N340_01711
Gene type
protein coding
RefSeq status
MODEL
Organism
Tauraco erythrolophus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Otidimorphae; Musophagiformes; Musophagidae; Tauraco
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See ATRN in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current ASM70936v1 (GCF_000709365.1) Unplaced Scaffold NW_010060481.1 (88428..179768, complement)

NW_010060481.1Genomic Context describing neighboring genes Neighboring gene GDNF family receptor alpha-4-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010060481.1 Unplaced Scaffold Reference ASM70936v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
attractin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tauraco erythrolophus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70936v1

Genomic

  1. NW_010060481.1 Reference ASM70936v1

    Range
    88428..179768 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009983892.1 → XP_009982194.1  attractin

    UniProtKB/TrEMBL
    A0A093CSL7
    Conserved Domains (4) summary
    cd00055
    Location:360 → 405
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    pfam01437
    Location:230 → 281
    PSI; Plexin repeat
    cl02432
    Location:90 → 218
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    cl15693
    Location:277 → 304
    Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
Nucleotide Protein
Heading Accession and Version

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