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GALNT11 polypeptide N-acetylgalactosaminyltransferase 11 [ Tyto alba (common barn owl) ]

Gene ID: 104368148, updated on 3-Aug-2024

Summary

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Gene symbol
GALNT11
Gene description
polypeptide N-acetylgalactosaminyltransferase 11
Gene type
protein coding
RefSeq status
MODEL
Organism
Tyto alba
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Strigiformes; Tytonidae; Tyto
Orthologs
human mouse all
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Genomic context

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See GALNT11 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
102 current T.alba_DEE_v4.0 (GCF_018691265.1) Unplaced Scaffold NW_024881313.1 (34199486..34252295, complement)
100 previous assembly ASM68720v1 (GCF_000687205.1) Unplaced Scaffold NW_009977079.1 (15556..51476)

NW_024881313.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122154345 Neighboring gene X-ray repair cross complementing 2 Neighboring gene lysine methyltransferase 2C Neighboring gene protein kinase AMP-activated non-catalytic subunit gamma 2 Neighboring gene uncharacterized LOC116965606 Neighboring gene Ras homolog, mTORC1 binding

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Notch binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tyto alba Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T.alba_DEE_v4.0

Genomic

  1. NW_024881313.1 Reference T.alba_DEE_v4.0

    Range
    34199486..34252295 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042802236.1 → XP_042658170.1  polypeptide N-acetylgalactosaminyltransferase 11

    UniProtKB/TrEMBL
    A0A093ELJ5
    Conserved Domains (2) summary
    cd02510
    Location:154 → 452
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:483 → 604
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_042802235.1 → XP_042658169.1  polypeptide N-acetylgalactosaminyltransferase 11

    UniProtKB/TrEMBL
    A0A093ELJ5
    Conserved Domains (2) summary
    cd02510
    Location:154 → 452
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:483 → 604
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  3. XM_033009724.2 → XP_032865615.1  polypeptide N-acetylgalactosaminyltransferase 11

    UniProtKB/TrEMBL
    A0A093ELJ5
    Conserved Domains (2) summary
    cd02510
    Location:154 → 452
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:483 → 604
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  4. XM_033009725.2 → XP_032865616.1  polypeptide N-acetylgalactosaminyltransferase 11

    UniProtKB/TrEMBL
    A0A093ELJ5
    Conserved Domains (2) summary
    cd02510
    Location:154 → 452
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:483 → 604
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  5. XM_033009723.2 → XP_032865614.1  polypeptide N-acetylgalactosaminyltransferase 11

    UniProtKB/TrEMBL
    A0A093ELJ5
    Conserved Domains (2) summary
    cd02510
    Location:154 → 452
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:483 → 604
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  6. XM_033009722.2 → XP_032865613.1  polypeptide N-acetylgalactosaminyltransferase 11

    UniProtKB/TrEMBL
    A0A093ELJ5
    Conserved Domains (2) summary
    cd02510
    Location:154 → 452
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:483 → 604
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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