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OTOA otoancorin [ Tyto alba (common barn owl) ]

Gene ID: 104365340, updated on 3-Aug-2024

Summary

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Gene symbol
OTOA
Gene description
otoancorin
Locus tag
N341_00401
Gene type
protein coding
RefSeq status
MODEL
Organism
Tyto alba
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Strigiformes; Tytonidae; Tyto
Orthologs
human mouse all
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Genomic context

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See OTOA in Genome Data Viewer
Location:
chromosome: Un
Exon count:
31
Annotation release Status Assembly Chr Location
102 current T.alba_DEE_v4.0 (GCF_018691265.1) Unplaced Scaffold NW_024881302.1 (8838967..8881911, complement)
100 previous assembly ASM68720v1 (GCF_000687205.1) Unplaced Scaffold NW_010015727.1 (24414..61741)

NW_024881302.1Genomic Context describing neighboring genes Neighboring gene diacylglycerol lipase beta Neighboring gene KDEL endoplasmic reticulum protein retention receptor 2 Neighboring gene methyltransferase 9, His-X-His N1(pi)-histidine Neighboring gene immunoglobulin superfamily member 6 Neighboring gene transmembrane protein 180

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
otoancorin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tyto alba Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T.alba_DEE_v4.0

Genomic

  1. NW_024881302.1 Reference T.alba_DEE_v4.0

    Range
    8838967..8881911 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009972112.3 → XP_009970414.2  otoancorin

    UniProtKB/TrEMBL
    A0A093HTA0
    Conserved Domains (1) summary
    pfam06060
    Location:595 → 964
    Mesothelin; Pre-pro-megakaryocyte potentiating factor precursor (Mesothelin)
Nucleotide Protein
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