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CH25H cholesterol 25-hydroxylase [ Tyto alba (common barn owl) ]

Gene ID: 104363239, updated on 3-Aug-2024

Summary

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Gene symbol
CH25H
Gene description
cholesterol 25-hydroxylase
Locus tag
N341_11339
Gene type
protein coding
RefSeq status
MODEL
Organism
Tyto alba
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Strigiformes; Tytonidae; Tyto
Orthologs
human mouse all
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Genomic context

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See CH25H in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
102 current T.alba_DEE_v4.0 (GCF_018691265.1) Unplaced Scaffold NW_024881261.1 (19892437..19894754)
100 previous assembly ASM68720v1 (GCF_000687205.1) Unplaced Scaffold NW_010007678.1 (25705..26715, complement)

NW_024881261.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 16 member 12 Neighboring gene interferon-induced protein with tetratricopeptide repeats 5 Neighboring gene lipase A, lysosomal acid type Neighboring gene Fas cell surface death receptor Neighboring gene actin alpha 2, smooth muscle

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables C-4 methylsterol oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables steroid hydroxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sterol biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cholesterol 25-hydroxylase
Names
Cholesterol 25-hydroxylase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tyto alba Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T.alba_DEE_v4.0

Genomic

  1. NW_024881261.1 Reference T.alba_DEE_v4.0

    Range
    19892437..19894754
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009969658.3 → XP_009967960.3  cholesterol 25-hydroxylase

    UniProtKB/TrEMBL
    A0A093HK46
    Conserved Domains (1) summary
    COG3000
    Location:65 → 292
    ERG3; Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily [Lipid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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