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P3H2 prolyl 3-hydroxylase 2 [ Tyto alba (common barn owl) ]

Gene ID: 104360794, updated on 3-Aug-2024

Summary

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Gene symbol
P3H2
Gene description
prolyl 3-hydroxylase 2
Locus tag
N341_02054
Gene type
protein coding
RefSeq status
MODEL
Organism
Tyto alba
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Strigiformes; Tytonidae; Tyto
Orthologs
human mouse all
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Genomic context

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See P3H2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
102 current T.alba_DEE_v4.0 (GCF_018691265.1) Unplaced Scaffold NW_024881262.1 (13473059..13545387, complement)
100 previous assembly ASM68720v1 (GCF_000687205.1) Unplaced Scaffold NW_009998347.1 (54065..69461)

NW_024881262.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116960140 Neighboring gene tumor protein p63 Neighboring gene claudin 1 Neighboring gene claudin 16

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables procollagen-proline 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in collagen metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prolyl 3-hydroxylase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tyto alba Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T.alba_DEE_v4.0

Genomic

  1. NW_024881262.1 Reference T.alba_DEE_v4.0

    Range
    13473059..13545387 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032986835.2 → XP_032842726.2  prolyl 3-hydroxylase 2

    Conserved Domains (1) summary
    smart00702
    Location:464 → 662
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues

RNA

  1. XR_006166036.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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