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ALG6 ALG6 alpha-1,3-glucosyltransferase [ Tyto alba (common barn owl) ]

Gene ID: 104359566, updated on 18-Sep-2024

Summary

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Gene symbol
ALG6
Gene description
ALG6 alpha-1,3-glucosyltransferase
Locus tag
N341_08454
Gene type
protein coding
RefSeq status
MODEL
Organism
Tyto alba
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Strigiformes; Tytonidae; Tyto
Orthologs
human mouse all
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Genomic context

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See ALG6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
102 current T.alba_DEE_v4.0 (GCF_018691265.1) Unplaced Scaffold NW_024881272.1 (32952072..32975208)
100 previous assembly ASM68720v1 (GCF_000687205.1) Unplaced Scaffold NW_009993535.1 (2720..22713)

NW_024881272.1Genomic Context describing neighboring genes Neighboring gene autophagy related 4C cysteine peptidase Neighboring gene forkhead box D3 Neighboring gene integrin subunit beta 3 binding protein Neighboring gene EF-hand calcium binding domain 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase
Names
Dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tyto alba Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T.alba_DEE_v4.0

Genomic

  1. NW_024881272.1 Reference T.alba_DEE_v4.0

    Range
    32952072..32975208
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042785479.1 → XP_042641413.1  dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase

    UniProtKB/TrEMBL
    A0A093F4E4
    Conserved Domains (1) summary
    pfam03155
    Location:14 → 485
    Alg6_Alg8; ALG6, ALG8 glycosyltransferase family

  2. XM_033008879.2 → XP_032864770.1  dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase

    UniProtKB/TrEMBL
    A0A093F4E4
    Conserved Domains (1) summary
    pfam03155
    Location:14 → 485
    Alg6_Alg8; ALG6, ALG8 glycosyltransferase family

  3. XM_033008880.2 → XP_032864771.1  dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase

    UniProtKB/TrEMBL
    A0A093F4E4
    Conserved Domains (1) summary
    pfam03155
    Location:14 → 485
    Alg6_Alg8; ALG6, ALG8 glycosyltransferase family

  4. XM_033008878.2 → XP_032864769.1  dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase

    UniProtKB/TrEMBL
    A0A093F4E4
    Conserved Domains (1) summary
    pfam03155
    Location:14 → 485
    Alg6_Alg8; ALG6, ALG8 glycosyltransferase family
Nucleotide Protein
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