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LINC00376 long intergenic non-protein coding RNA 376 [ Homo sapiens (human) ]

Gene ID: 104355293, updated on 27-Aug-2024

Summary

Official Symbol
LINC00376provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 376provided by HGNC
Primary source
HGNC:HGNC:42701
See related
Ensembl:ENSG00000227564 AllianceGenome:HGNC:42701
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

Location:
13q21.31
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (63183101..63328094, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (62404545..62549566, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (63757234..63902227, complement)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 448 Neighboring gene uncharacterized LOC105370234 Neighboring gene OCT4 hESC enhancer GRCh37_chr13:63631082-63631583 Neighboring gene uncharacterized LOC124903236 Neighboring gene H3K27ac hESC enhancer GRCh37_chr13:63978433-63978933 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_33081 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_33146 Neighboring gene uncharacterized LOC105370237

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_126409.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL354810, AL355609
    Related
    ENST00000439454.3

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    63183101..63328094 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    62404545..62549566 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)