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LOC104354313 natural resistance-associated macrophage protein 1-like [ Leptosomus discolor (cuckoo roller) ]

Gene ID: 104354313, updated on 3-Aug-2024

Summary

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Gene symbol
LOC104354313
Gene description
natural resistance-associated macrophage protein 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Leptosomus discolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Coraciiformes; Leptosomidae; Leptosomus
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See LOC104354313 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ASM69178v1 (GCF_000691785.1) Unplaced Scaffold NW_009842577.1 (1333..5811)

NW_009842577.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009842577.1 Unplaced Scaffold Reference ASM69178v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cadmium ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables manganese ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in metal ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: natural resistance-associated macrophage protein 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Leptosomus discolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69178v1

Genomic

  1. NW_009842577.1 Reference ASM69178v1

    Range
    1333..5811
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009961194.1 → XP_009959496.1  LOW QUALITY PROTEIN: natural resistance-associated macrophage protein 1-like

    Conserved Domains (3) summary
    TIGR01197
    Location:57 → 383
    nramp; NRAMP (natural resistance-associated macrophage protein) metal ion transporters
    pfam01566
    Location:79 → 383
    Nramp; Natural resistance-associated macrophage protein
    pfam16625
    Location:6 → 41
    ISET-FN3_linker; Unstructured linking region I-set and fnIII on Brother of CDO
Nucleotide Protein
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