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LAMA1 laminin subunit alpha 1 [ Leptosomus discolor (cuckoo roller) ]

Gene ID: 104348651, updated on 3-Aug-2024

Summary

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Gene symbol
LAMA1
Gene description
laminin subunit alpha 1
Locus tag
N330_08004
Gene type
protein coding
RefSeq status
MODEL
Organism
Leptosomus discolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Coraciiformes; Leptosomidae; Leptosomus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See LAMA1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
45
Annotation release Status Assembly Chr Location
100 current ASM69178v1 (GCF_000691785.1) Unplaced Scaffold NW_009870635.1 (21124..87774)

NW_009870635.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009870635.1 Unplaced Scaffold Reference ASM69178v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix structural constituent IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in blood vessel morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in camera-type eye development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of embryonic development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in basement membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
laminin subunit alpha-1
Names
Laminin subunit alpha-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Leptosomus discolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69178v1

Genomic

  1. NW_009870635.1 Reference ASM69178v1

    Range
    21124..87774
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009953991.1 → XP_009952293.1  laminin subunit alpha-1

    UniProtKB/TrEMBL
    A0A091PZE7
    Conserved Domains (6) summary
    smart00136
    Location:20 → 268
    LamNT; Laminin N-terminal domain (domain VI)
    cd00055
    Location:901 → 949
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    pfam00052
    Location:568 → 696
    Laminin_B; Laminin B (Domain IV)
    pfam00053
    Location:951 → 998
    Laminin_EGF; Laminin EGF domain
    pfam06008
    Location:1571 → 1817
    Laminin_I; Laminin Domain I
    pfam06009
    Location:2016 → 2150
    Laminin_II; Laminin Domain II
Nucleotide Protein
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