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LAMA2 laminin subunit alpha 2 [ Leptosomus discolor (cuckoo roller) ]

Gene ID: 104344367, updated on 3-Aug-2024

Summary

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Gene symbol
LAMA2
Gene description
laminin subunit alpha 2
Locus tag
N330_12775
Gene type
protein coding
RefSeq status
MODEL
Organism
Leptosomus discolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Coraciiformes; Leptosomidae; Leptosomus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See LAMA2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
58
Annotation release Status Assembly Chr Location
100 current ASM69178v1 (GCF_000691785.1) Unplaced Scaffold NW_009857448.1 (26856..240944)

NW_009857448.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009857448.1 Unplaced Scaffold Reference ASM69178v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of embryonic development IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
laminin subunit alpha-2
Names
Laminin subunit alpha-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Leptosomus discolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69178v1

Genomic

  1. NW_009857448.1 Reference ASM69178v1

    Range
    26856..240944
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009948483.1 → XP_009946785.1  laminin subunit alpha-2

    Conserved Domains (13) summary
    smart00180
    Location:531 → 575
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    smart00281
    Location:793 → 929
    LamB; Laminin B domain
    COG1340
    Location:1306 → 1574
    COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
    cd00055
    Location:481 → 529
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:2541 → 2693
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam00052
    Location:147 → 275
    Laminin_B; Laminin B (Domain IV)
    pfam00053
    Location:33 → 79
    Laminin_EGF; Laminin EGF domain
    pfam00054
    Location:2393 → 2521
    Laminin_G_1; Laminin G domain
    pfam06008
    Location:1154 → 1415
    Laminin_I; Laminin Domain I
    pfam06009
    Location:1603 → 1739
    Laminin_II; Laminin Domain II
    cl00143
    Location:1199 → 1309
    SynN; Syntaxin N-terminus domain; syntaxins are nervous system-specific proteins implicated in the docking of synaptic vesicles with the presynaptic plasma membrane; they are a family of receptors for intracellular transport vesicles; each target membrane may ...
    cl02488
    Location:1260 → 1450
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl23763
    Location:1392 → 1565
    MCP_signal; Methyl-accepting chemotaxis protein (MCP), signaling domain
Nucleotide Protein
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