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GTDC1 glycosyltransferase like domain containing 1 [ Leptosomus discolor (cuckoo roller) ]

Gene ID: 104343623, updated on 3-Aug-2024

Summary

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Gene symbol
GTDC1
Gene description
glycosyltransferase like domain containing 1
Locus tag
N330_13104
Gene type
protein coding
RefSeq status
MODEL
Organism
Leptosomus discolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Coraciiformes; Leptosomidae; Leptosomus
Orthologs
human mouse all
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Genomic context

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See GTDC1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ASM69178v1 (GCF_000691785.1) Unplaced Scaffold NW_009855221.1 (10230..134742)

NW_009855221.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009855221.1 Unplaced Scaffold Reference ASM69178v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycosyltransferase-like domain-containing protein 1
Names
Glycosyltransferase-like domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Leptosomus discolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69178v1

Genomic

  1. NW_009855221.1 Reference ASM69178v1

    Range
    10230..134742
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009947568.1 → XP_009945870.1  glycosyltransferase-like domain-containing protein 1 isoform X1

    See identical proteins and their annotated locations for XP_009945870.1

    UniProtKB/TrEMBL
    A0A091PK74
    Conserved Domains (3) summary
    COG0438
    Location:294 → 455
    RfaB; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    pfam12038
    Location:2 → 165
    DUF3524; Domain of unknown function (DUF3524)
    cl10013
    Location:298 → 387
    Glycosyltransferase_GTB_type; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate ...

  2. XM_009947569.1 → XP_009945871.1  glycosyltransferase-like domain-containing protein 1 isoform X2

    Conserved Domains (1) summary
    pfam12038
    Location:2 → 165
    DUF3524; Domain of unknown function (DUF3524)
Nucleotide Protein
Heading Accession and Version

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