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SUMF1 sulfatase modifying factor 1 [ Opisthocomus hoazin ]

Gene ID: 104338380, updated on 3-Aug-2024

Summary

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Gene symbol
SUMF1
Gene description
sulfatase modifying factor 1
Locus tag
N306_02091
Gene type
protein coding
RefSeq status
MODEL
Organism
Opisthocomus hoazin
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Opisthocomiformes; Opisthocomidae; Opisthocomus
Orthologs
human mouse all
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Genomic context

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See SUMF1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current ASM69207v1 (GCF_000692075.1) Unplaced Scaffold NW_009899959.1 (188553..218504, complement)

NW_009899959.1Genomic Context describing neighboring genes Neighboring gene histone-lysine N-methyltransferase SETMAR Neighboring gene leucine rich repeat neuronal 1 Neighboring gene inositol 1,4,5-trisphosphate receptor type 1 Neighboring gene basic helix-loop-helix family member e40

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009899959.1 Unplaced Scaffold Reference ASM69207v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sulfatase-modifying factor 1
Names
Sulfatase-modifying factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Opisthocomus hoazin Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69207v1

Genomic

  1. NW_009899959.1 Reference ASM69207v1

    Range
    188553..218504 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009944416.1 → XP_009942718.1  sulfatase-modifying factor 1

    UniProtKB/TrEMBL
    A0A091VH95
    Conserved Domains (2) summary
    COG1262
    Location:1 → 278
    YfmG; Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain [Posttranslational modification, protein turnover, chaperones]
    pfam03781
    Location:1 → 277
    FGE-sulfatase; Sulfatase-modifying factor enzyme 1
Nucleotide Protein
Heading Accession and Version

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