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SULF1 sulfatase 1 [ Opisthocomus hoazin ]

Gene ID: 104334834, updated on 3-Aug-2024

Summary

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Gene symbol
SULF1
Gene description
sulfatase 1
Locus tag
N306_05208
Gene type
protein coding
RefSeq status
MODEL
Organism
Opisthocomus hoazin
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Opisthocomiformes; Opisthocomidae; Opisthocomus
Orthologs
human mouse all
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Genomic context

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See SULF1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
100 current ASM69207v1 (GCF_000692075.1) Unplaced Scaffold NW_009902742.1 (1498580..1561703)

NW_009902742.1Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2 Neighboring gene ribulose-phosphate 3-epimerase-like Neighboring gene chromosome unknown open reading frame, human C8orf34 Neighboring gene solute carrier organic anion transporter family member 5A1 Neighboring gene PR/SET domain 14

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009902742.1 Unplaced Scaffold Reference ASM69207v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine-6-sulfatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycosaminoglycan binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
extracellular sulfatase Sulf-1
Names
Extracellular sulfatase Sulf-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Opisthocomus hoazin Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69207v1

Genomic

  1. NW_009902742.1 Reference ASM69207v1

    Range
    1498580..1561703
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009940498.1 → XP_009938800.1  extracellular sulfatase Sulf-1

    See identical proteins and their annotated locations for XP_009938800.1

    UniProtKB/TrEMBL
    A0A091XR10
    Conserved Domains (4) summary
    COG3119
    Location:42 → 394
    AslA; Arylsulfatase A or related enzyme [Inorganic ion transport and metabolism]
    pfam12548
    Location:541 → 673
    DUF3740; Sulfatase protein
    cd16147
    Location:42 → 384
    G6S; glucosamine (N-acetyl)-6-sulfatase(G6S, GNS) AND sulfatase 1(SULF1)
    cl23718
    Location:764 → 813
    ALP_like; alkaline phosphatases and sulfatases
Nucleotide Protein
Heading Accession and Version

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