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GAPDH glyceraldehyde-3-phosphate dehydrogenase [ Opisthocomus hoazin ]

Gene ID: 104327414, updated on 3-Aug-2024

Summary

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Gene symbol
GAPDH
Gene description
glyceraldehyde-3-phosphate dehydrogenase
Locus tag
N306_11715
Gene type
protein coding
RefSeq status
MODEL
Organism
Opisthocomus hoazin
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Opisthocomiformes; Opisthocomidae; Opisthocomus
Orthologs
human mouse all
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Genomic context

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See GAPDH in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ASM69207v1 (GCF_000692075.1) Unplaced Scaffold NW_009899534.1 (112985..125089, complement)

NW_009899534.1Genomic Context describing neighboring genes Neighboring gene chromodomain helicase DNA binding protein 4 Neighboring gene intermediate filament family orphan 1 Neighboring gene non-SMC condensin I complex subunit D2 Neighboring gene mitochondrial ribosomal protein L51

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009899534.1 Unplaced Scaffold Reference ASM69207v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables NADP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glucose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glyceraldehyde-3-phosphate dehydrogenase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Opisthocomus hoazin Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69207v1

Genomic

  1. NW_009899534.1 Reference ASM69207v1

    Range
    112985..125089 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009932317.1 → XP_009930619.1  glyceraldehyde-3-phosphate dehydrogenase

    UniProtKB/TrEMBL
    A0A091V6F0
    Conserved Domains (3) summary
    PTZ00023
    Location:39 → 364
    PTZ00023; glyceraldehyde-3-phosphate dehydrogenase; Provisional
    pfam00044
    Location:39 → 181
    Gp_dh_N; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
    pfam02800
    Location:186 → 343
    Gp_dh_C; Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
Nucleotide Protein
Heading Accession and Version

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