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GALNT9 polypeptide N-acetylgalactosaminyltransferase 9 [ Dryobates pubescens (Downy woodpecker) ]

Gene ID: 104309667, updated on 10-Oct-2024

Summary

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Gene symbol
GALNT9
Gene description
polypeptide N-acetylgalactosaminyltransferase 9
Locus tag
N307_14135
See related
EnsemblRapid:ENSPPUG00010012388
Gene type
protein coding
RefSeq status
MODEL
Organism
Dryobates pubescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Piciformes; Picidae; Dryobates
Orthologs
human mouse all
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Genomic context

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See GALNT9 in Genome Data Viewer
Location:
chromosome: 25
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_03 current bDryPub1.pri (GCF_014839835.1) 25 NC_071636.1 (11843365..12018572, complement)
100 previous assembly ASM69900v1 (GCF_000699005.1) Unplaced Scaffold NW_009662222.1 (4206591..4373595)

Chromosome 25 - NC_071636.1Genomic Context describing neighboring genes Neighboring gene E1A-binding protein p400 Neighboring gene nucleolar complex associated 4 homolog Neighboring gene fibrosin like 1 Neighboring gene checkpoint with forkhead and ring finger domains

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_014839835.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bDryPub1.pri

Genomic

  1. NC_071636.1 Reference bDryPub1.pri

    Range
    11843365..12018572 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009911015.2 → XP_009909317.1  polypeptide N-acetylgalactosaminyltransferase 9 isoform X1

    UniProtKB/TrEMBL
    A0A093G2P5
    Related
    ENSPPUP00010010920.1, ENSPPUT00010019368.1
    Conserved Domains (3) summary
    cd02510
    Location:155 → 454
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:467 → 595
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:465 → 593
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_054172907.1 → XP_054028882.1  polypeptide N-acetylgalactosaminyltransferase 9 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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