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TMED5 transmembrane p24 trafficking protein 5 [ Dryobates pubescens (Downy woodpecker) ]

Gene ID: 104308667, updated on 3-Aug-2024

Summary

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Gene symbol
TMED5
Gene description
transmembrane p24 trafficking protein 5
Locus tag
N307_00200
See related
EnsemblRapid:ENSPPUG00010008316
Gene type
protein coding
RefSeq status
MODEL
Organism
Dryobates pubescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Piciformes; Picidae; Dryobates
Orthologs
human mouse all
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Genomic context

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See TMED5 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_03 current bDryPub1.pri (GCF_014839835.1) 11 NC_071622.1 (16629879..16635927)
100 previous assembly ASM69900v1 (GCF_000699005.1) Unplaced Scaffold NW_009661888.1 (593994..599265, complement)

Chromosome 11 - NC_071622.1Genomic Context describing neighboring genes Neighboring gene retinol dehydrogenase 8 Neighboring gene down-regulator of transcription 1 Neighboring gene coiled-coil domain containing 18 Neighboring gene metal response element binding transcription factor 2 Neighboring gene divergent protein kinase domain 1A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane emp24 domain-containing protein 5
Names
Transmembrane emp24 domain-containing protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_014839835.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bDryPub1.pri

Genomic

  1. NC_071622.1 Reference bDryPub1.pri

    Range
    16629879..16635927
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054165065.1 → XP_054021040.1  transmembrane emp24 domain-containing protein 5

  2. XM_009909879.2 → XP_009908181.2  transmembrane emp24 domain-containing protein 5

    Related
    ENSPPUP00010007812.1, ENSPPUT00010013032.1
Nucleotide Protein
Heading Accession and Version

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