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SDC1 syndecan 1 [ Dryobates pubescens (Downy woodpecker) ]

Gene ID: 104308311, updated on 3-Aug-2024

Summary

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Gene symbol
SDC1
Gene description
syndecan 1
Locus tag
N307_04005
Gene type
protein coding
RefSeq status
MODEL
Organism
Dryobates pubescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Piciformes; Picidae; Dryobates
Also known as
Syndecan-1
Orthologs
human mouse all
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Genomic context

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See SDC1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_03 current bDryPub1.pri (GCF_014839835.1) 3 NC_071614.1 (28638341..28663193, complement)
100 previous assembly ASM69900v1 (GCF_000699005.1) Unplaced Scaffold NW_009692628.1 (240055..258961)

Chromosome 3 - NC_071614.1Genomic Context describing neighboring genes Neighboring gene nucleoplasmin-2-like Neighboring gene uncharacterized LOC128899439 Neighboring gene pumilio RNA binding family member 2 Neighboring gene b(0,+)-type amino acid transporter 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
syndecan-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_014839835.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bDryPub1.pri

Genomic

  1. NC_071614.1 Reference bDryPub1.pri

    Range
    28638341..28663193 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054179883.1 → XP_054035858.1  syndecan-1

    UniProtKB/TrEMBL
    A0A093H3A5
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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