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AGRN agrin [ Dryobates pubescens (Downy woodpecker) ]

Gene ID: 104305935, updated on 3-Aug-2024

Summary

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Gene symbol
AGRN
Gene description
agrin
See related
EnsemblRapid:ENSPPUG00010031507
Gene type
protein coding
RefSeq status
MODEL
Organism
Dryobates pubescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Piciformes; Picidae; Dryobates
Orthologs
human mouse all
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Genomic context

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See AGRN in Genome Data Viewer
Location:
chromosome: 33
Exon count:
40
Annotation release Status Assembly Chr Location
RS_2023_03 current bDryPub1.pri (GCF_014839835.1) 33 NC_071644.1 (6623493..6775384)
100 previous assembly ASM69900v1 (GCF_000699005.1) Unplaced Scaffold NW_009665663.1 (3132284..3308137)

Chromosome 33 - NC_071644.1Genomic Context describing neighboring genes Neighboring gene PPARGC1 and ESRR induced regulator, muscle 1 Neighboring gene hes family bHLH transcription factor 4 Neighboring gene tyrosine-protein phosphatase non-receptor type 11 Neighboring gene ring finger protein 223

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables laminin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled acetylcholine receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in receptor clustering IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
agrin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_014839835.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bDryPub1.pri

Genomic

  1. NC_071644.1 Reference bDryPub1.pri

    Range
    6623493..6775384
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054175724.1 → XP_054031699.1  agrin

    Related
    ENSPPUP00010025184.1, ENSPPUT00010049479.1
Nucleotide Protein
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