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AGXT alanine--glyoxylate aminotransferase [ Dryobates pubescens (Downy woodpecker) ]

Gene ID: 104305526, updated on 18-Sep-2024

Summary

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Gene symbol
AGXT
Gene description
alanine--glyoxylate aminotransferase
See related
EnsemblRapid:ENSPPUG00010008603
Gene type
protein coding
RefSeq status
MODEL
Organism
Dryobates pubescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Piciformes; Picidae; Dryobates
Orthologs
human mouse all
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Genomic context

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See AGXT in Genome Data Viewer
Location:
chromosome: 13
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_03 current bDryPub1.pri (GCF_014839835.1) 13 NC_071624.1 (1542754..1546334)
100 previous assembly ASM69900v1 (GCF_000699005.1) Unplaced Scaffold NW_009665536.1 (70774..77066, complement)

Chromosome 13 - NC_071624.1Genomic Context describing neighboring genes Neighboring gene ILK associated serine/threonine phosphatase Neighboring gene kinesin family member 1A Neighboring gene mab-21 like 4 Neighboring gene sushi, nidogen and EGF like domains 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-serine-pyruvate transaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables alanine-glyoxylate transaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycine biosynthetic process, by transamination of glyoxylate IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alanine--glyoxylate aminotransferase
Names
alanine--glyoxylate and serine--pyruvate aminotransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_014839835.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bDryPub1.pri

Genomic

  1. NC_071624.1 Reference bDryPub1.pri

    Range
    1542754..1546334
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009906383.2 → XP_009904685.2  alanine--glyoxylate aminotransferase

    Related
    ENSPPUP00010008035.1, ENSPPUT00010013494.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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