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CNTN2 contactin 2 [ Dryobates pubescens (Downy woodpecker) ]

Gene ID: 104304761, updated on 3-Aug-2024

Summary

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Gene symbol
CNTN2
Gene description
contactin 2
Locus tag
N307_08701
See related
EnsemblRapid:ENSPPUG00010027284
Gene type
protein coding
RefSeq status
MODEL
Organism
Dryobates pubescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Piciformes; Picidae; Dryobates
Orthologs
human mouse all
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Genomic context

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See CNTN2 in Genome Data Viewer
Location:
chromosome: 35
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2023_03 current bDryPub1.pri (GCF_014839835.1) 35 NC_071646.1 (1779211..1809369)
100 previous assembly ASM69900v1 (GCF_000699005.1) Unplaced Scaffold NW_009665256.1 (75495..95232)

Chromosome 35 - NC_071646.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat neuronal 2 Neighboring gene neurofascin Neighboring gene transmembrane protein 81 Neighboring gene RB binding protein 5, histone lysine methyltransferase complex subunit

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell-cell adhesion mediator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in brain development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
contactin-2
Names
Contactin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_014839835.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bDryPub1.pri

Genomic

  1. NC_071646.1 Reference bDryPub1.pri

    Range
    1779211..1809369
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054176468.1 → XP_054032443.1  contactin-2 isoform X1

    Related
    ENSPPUP00010022756.1, ENSPPUT00010042779.1

  2. XM_054176470.1 → XP_054032445.1  contactin-2 isoform X2

Nucleotide Protein
Heading Accession and Version

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