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SULF1 sulfatase 1 [ Dryobates pubescens (Downy woodpecker) ]

Gene ID: 104303462, updated on 12-Mar-2024

Summary

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Gene symbol
SULF1
Gene description
sulfatase 1
Locus tag
N307_01879
See related
EnsemblRapid:ENSPPUG00010013683
Gene type
protein coding
RefSeq status
MODEL
Organism
Dryobates pubescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Piciformes; Picidae; Dryobates
Orthologs
human mouse all
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Genomic context

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See SULF1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2023_03 current bDryPub1.pri (GCF_014839835.1) 3 NC_071614.1 (492596..524087, complement)
100 previous assembly ASM69900v1 (GCF_000699005.1) Unplaced Scaffold NW_009664874.1 (489491..519133, complement)

Chromosome 3 - NC_071614.1Genomic Context describing neighboring genes Neighboring gene PR/SET domain 14 Neighboring gene solute carrier organic anion transporter family member 5A1 Neighboring gene chromosome 3 C8orf34 homolog Neighboring gene phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine-6-sulfatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycosaminoglycan binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
extracellular sulfatase Sulf-1
Names
Extracellular sulfatase Sulf-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_014839835.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bDryPub1.pri

Genomic

  1. NC_071614.1 Reference bDryPub1.pri

    Range
    492596..524087 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054178930.1 → XP_054034905.1  extracellular sulfatase Sulf-1 isoform X3

  2. XM_009904085.2 → XP_009902387.1  extracellular sulfatase Sulf-1 isoform X2

    See identical proteins and their annotated locations for XP_009902387.1

    UniProtKB/TrEMBL
    A0A093GLD7
    Conserved Domains (4) summary
    COG3119
    Location:42 → 394
    AslA; Arylsulfatase A or related enzyme [Inorganic ion transport and metabolism]
    pfam12548
    Location:541 → 669
    DUF3740; Sulfatase protein
    cd16147
    Location:42 → 384
    G6S; glucosamine (N-acetyl)-6-sulfatase(G6S, GNS) AND sulfatase 1(SULF1)
    cl23718
    Location:760 → 809
    ALP_like; alkaline phosphatases and sulfatases

  3. XM_054178921.1 → XP_054034896.1  extracellular sulfatase Sulf-1 isoform X1

    Related
    ENSPPUP00010012124.1, ENSPPUT00010021403.1
Nucleotide Protein
Heading Accession and Version

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