U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CHAT choline O-acetyltransferase [ Dryobates pubescens (Downy woodpecker) ]

Gene ID: 104301344, updated on 3-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
CHAT
Gene description
choline O-acetyltransferase
Locus tag
N307_09479
See related
EnsemblRapid:ENSPPUG00010015010
Gene type
protein coding
RefSeq status
MODEL
Organism
Dryobates pubescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Piciformes; Picidae; Dryobates
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CHAT in Genome Data Viewer
Location:
chromosome: 8
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_03 current bDryPub1.pri (GCF_014839835.1) 8 NC_071619.1 (26088989..26119206)
100 previous assembly ASM69900v1 (GCF_000699005.1) Unplaced Scaffold NW_009664228.1 (1539268..1569284, complement)

Chromosome 8 - NC_071619.1Genomic Context describing neighboring genes Neighboring gene retinal G protein coupled receptor Neighboring gene solute carrier family 18 member A3 Neighboring gene oxoglutarate dehydrogenase L Neighboring gene poly(ADP-ribose) glycohydrolase

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables choline O-acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acetylcholine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuromuscular synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
choline O-acetyltransferase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_014839835.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bDryPub1.pri

Genomic

  1. NC_071619.1 Reference bDryPub1.pri

    Range
    26088989..26119206
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009901718.2 → XP_009900020.2  choline O-acetyltransferase

    Related
    ENSPPUP00010013726.1, ENSPPUT00010023356.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.