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TIGAR TP53 induced glycolysis regulatory phosphatase [ Dryobates pubescens (Downy woodpecker) ]

Gene ID: 104301128, updated on 3-Aug-2024

Summary

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Gene symbol
TIGAR
Gene description
TP53 induced glycolysis regulatory phosphatase
Locus tag
N307_04950
Gene type
protein coding
RefSeq status
MODEL
Organism
Dryobates pubescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Piciformes; Picidae; Dryobates
Orthologs
human mouse all
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Genomic context

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See TIGAR in Genome Data Viewer
Location:
chromosome: Z
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_03 current bDryPub1.pri (GCF_014839835.1) Z NC_071657.1 (134349638..134364112)
100 previous assembly ASM69900v1 (GCF_000699005.1) Unplaced Scaffold NW_009664124.1 (1674008..1689337, complement)

Chromosome Z - NC_071657.1Genomic Context describing neighboring genes Neighboring gene potassium voltage-gated channel subfamily A member 6-like Neighboring gene cyclin D2 Neighboring gene fibroblast growth factor 23 Neighboring gene fibroblast growth factor 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fructose-2,6-bisphosphate 2-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fructose 1,6-bisphosphate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fructose 2,6-bisphosphate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of glycolytic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of programmed cell death IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of pentose-phosphate shunt IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fructose-2,6-bisphosphatase TIGAR
Names
Fructose-2,6-bisphosphatase TIGAR

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_014839835.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bDryPub1.pri

Genomic

  1. NC_071657.1 Reference bDryPub1.pri

    Range
    134349638..134364112
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054178209.1 → XP_054034184.1  fructose-2,6-bisphosphatase TIGAR

Nucleotide Protein
Heading Accession and Version

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