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SC5D sterol-C5-desaturase [ Dryobates pubescens (Downy woodpecker) ]

Gene ID: 104301068, updated on 3-Aug-2024

Summary

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Gene symbol
SC5D
Gene description
sterol-C5-desaturase
Locus tag
N307_14384
See related
EnsemblRapid:ENSPPUG00010030774
Gene type
protein coding
RefSeq status
MODEL
Organism
Dryobates pubescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Piciformes; Picidae; Dryobates
Orthologs
human mouse all
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Genomic context

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See SC5D in Genome Data Viewer
Location:
chromosome: 34
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_03 current bDryPub1.pri (GCF_014839835.1) 34 NC_071645.1 (3136294..3140804)
100 previous assembly ASM69900v1 (GCF_000699005.1) Unplaced Scaffold NW_009664020.1 (948435..951210)

Chromosome 34 - NC_071645.1Genomic Context describing neighboring genes Neighboring gene glutamate ionotropic receptor kainate type subunit 4 Neighboring gene tubulin-specific chaperone cofactor E-like protein Neighboring gene sortilin related receptor 1 Neighboring gene uncharacterized LOC128898870

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol biosynthetic process via lathosterol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lathosterol oxidase
Names
Lathosterol oxidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_014839835.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bDryPub1.pri

Genomic

  1. NC_071645.1 Reference bDryPub1.pri

    Range
    3136294..3140804
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054176181.1 → XP_054032156.1  lathosterol oxidase

    Related
    ENSPPUP00010024759.1, ENSPPUT00010048208.1

  2. XM_054176180.1 → XP_054032155.1  lathosterol oxidase

Nucleotide Protein
Heading Accession and Version

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