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HEXB hexosaminidase subunit beta [ Dryobates pubescens (Downy woodpecker) ]

Gene ID: 104299700, updated on 3-Aug-2024

Summary

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Gene symbol
HEXB
Gene description
hexosaminidase subunit beta
Locus tag
N307_02019
See related
EnsemblRapid:ENSPPUG00010028140
Gene type
protein coding
RefSeq status
MODEL
Organism
Dryobates pubescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Piciformes; Picidae; Dryobates
Orthologs
human mouse all
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Genomic context

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See HEXB in Genome Data Viewer
Location:
chromosome: Z
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_03 current bDryPub1.pri (GCF_014839835.1) Z NC_071657.1 (58182908..58199824)
100 previous assembly ASM69900v1 (GCF_000699005.1) Unplaced Scaffold NW_009663513.1 (555694..571911, complement)

Chromosome Z - NC_071657.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128899394 Neighboring gene Rho guanine nucleotide exchange factor 28 Neighboring gene ectodermal-neural cortex 1 Neighboring gene GTP dependent ribosome recycling factor mitochondrial 2 Neighboring gene family with sequence similarity 169 member A Neighboring gene NSA2 ribosome biogenesis factor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-N-acetylhexosaminidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ganglioside catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycosaminoglycan metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-hexosaminidase subunit beta
Names
Beta-hexosaminidase subunit beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_014839835.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bDryPub1.pri

Genomic

  1. NC_071657.1 Reference bDryPub1.pri

    Range
    58182908..58199824
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054178533.1 → XP_054034508.1  beta-hexosaminidase subunit beta

    Related
    ENSPPUP00010023181.1, ENSPPUT00010044100.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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