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ABAT 4-aminobutyrate aminotransferase [ Dryobates pubescens (Downy woodpecker) ]

Gene ID: 104298726, updated on 6-Jun-2024

Summary

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Gene symbol
ABAT
Gene description
4-aminobutyrate aminotransferase
Locus tag
N307_08109
See related
EnsemblRapid:ENSPPUG00010025130
Gene type
protein coding
RefSeq status
MODEL
Organism
Dryobates pubescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Piciformes; Picidae; Dryobates
Orthologs
human mouse all
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Genomic context

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See ABAT in Genome Data Viewer
Location:
chromosome: 4
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_03 current bDryPub1.pri (GCF_014839835.1) 4 NC_071615.1 (14405331..14467526, complement)
100 previous assembly ASM69900v1 (GCF_000699005.1) Unplaced Scaffold NW_009663186.1 (2435906..2466831)

Chromosome 4 - NC_071615.1Genomic Context describing neighboring genes Neighboring gene phosphomannomutase 2 Neighboring gene transmembrane protein 186 Neighboring gene methyltransferase 22, Kin17 lysine Neighboring gene transmembrane protein 114

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4-aminobutyrate transaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in gamma-aminobutyric acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
4-aminobutyrate aminotransferase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_014839835.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bDryPub1.pri

Genomic

  1. NC_071615.1 Reference bDryPub1.pri

    Range
    14405331..14467526 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054180636.1 → XP_054036611.1  4-aminobutyrate aminotransferase, mitochondrial

    UniProtKB/TrEMBL
    A0A093GGK0
    Related
    ENSPPUP00010022191.1, ENSPPUT00010040991.1

  2. XM_054180638.1 → XP_054036613.1  4-aminobutyrate aminotransferase, mitochondrial

    UniProtKB/TrEMBL
    A0A093GGK0
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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