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PLPP1 phospholipid phosphatase 1 [ Dryobates pubescens (Downy woodpecker) ]

Gene ID: 104296764, updated on 3-Aug-2024

Summary

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Gene symbol
PLPP1
Gene description
phospholipid phosphatase 1
Locus tag
N307_08282
See related
EnsemblRapid:ENSPPUG00010020089
Gene type
protein coding
RefSeq status
MODEL
Organism
Dryobates pubescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Piciformes; Picidae; Dryobates
Orthologs
human mouse all
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Genomic context

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See PLPP1 in Genome Data Viewer
Location:
chromosome: Z
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_03 current bDryPub1.pri (GCF_014839835.1) Z NC_071657.1 (97042268..97117229, complement)
100 previous assembly ASM69900v1 (GCF_000699005.1) Unplaced Scaffold NW_009662652.1 (391418..449089)

Chromosome Z - NC_071657.1Genomic Context describing neighboring genes Neighboring gene DExH-box helicase 29 Neighboring gene Mtr4 exosome RNA helicase Neighboring gene U6 spliceosomal RNA Neighboring gene solute carrier family 38 member 9 Neighboring gene DEAD-box helicase 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phospholipid dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phospholipid phosphatase 1
Names
Lipid phosphate phosphohydrolase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_014839835.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bDryPub1.pri

Genomic

  1. NC_071657.1 Reference bDryPub1.pri

    Range
    97042268..97117229 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054178579.1 → XP_054034554.1  phospholipid phosphatase 1 isoform X2

    Related
    ENSPPUP00010018837.1, ENSPPUT00010031488.1

  2. XM_054178578.1 → XP_054034553.1  phospholipid phosphatase 1 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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