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HS3ST5 heparan sulfate-glucosamine 3-sulfotransferase 5 [ Dryobates pubescens (Downy woodpecker) ]

Gene ID: 104296644, updated on 3-Aug-2024

Summary

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Gene symbol
HS3ST5
Gene description
heparan sulfate-glucosamine 3-sulfotransferase 5
Locus tag
N307_01105
See related
EnsemblRapid:ENSPPUG00010020693
Gene type
protein coding
RefSeq status
MODEL
Organism
Dryobates pubescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Piciformes; Picidae; Dryobates
Orthologs
human mouse all
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Genomic context

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See HS3ST5 in Genome Data Viewer
Location:
chromosome: 28
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_03 current bDryPub1.pri (GCF_014839835.1) 28 NC_071639.1 (8877710..9067094)
100 previous assembly ASM69900v1 (GCF_000699005.1) Unplaced Scaffold NW_009662642.1 (3530002..3536488, complement)

Chromosome 28 - NC_071639.1Genomic Context describing neighboring genes Neighboring gene fyn related Src family tyrosine kinase Neighboring gene uncharacterized LOC128898617 Neighboring gene histone deacetylase 2 Neighboring gene myristoylated alanine rich protein kinase C substrate

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 5
Names
Heparan sulfate glucosamine 3-O-sulfotransferase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_014839835.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bDryPub1.pri

Genomic

  1. NC_071639.1 Reference bDryPub1.pri

    Range
    8877710..9067094
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054174098.1 → XP_054030073.1  heparan sulfate glucosamine 3-O-sulfotransferase 5

  2. XM_054174097.1 → XP_054030072.1  heparan sulfate glucosamine 3-O-sulfotransferase 5

  3. XM_054174099.1 → XP_054030074.1  heparan sulfate glucosamine 3-O-sulfotransferase 5

    Related
    ENSPPUP00010019364.1, ENSPPUT00010032473.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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