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ZPR1 ZPR1 zinc finger [ Charadrius vociferus (killdeer) ]

Gene ID: 104296099, updated on 3-Aug-2024

Summary

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Gene symbol
ZPR1
Gene description
ZPR1 zinc finger
Locus tag
N301_03719
Gene type
protein coding
RefSeq status
MODEL
Organism
Charadrius vociferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Charadriidae; Charadrius
Also known as
BUD13
Orthologs
human mouse all
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Genomic context

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See ZPR1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
28
Annotation release Status Assembly Chr Location
100 current ASM70802v2 (GCF_000708025.1) Unplaced Scaffold NW_009647217.1 (112193..124833)

NW_009647217.1Genomic Context describing neighboring genes Neighboring gene apolipoprotein A-I-like Neighboring gene SIK family kinase 3 Neighboring gene cell adhesion molecule 1 Neighboring gene RNA exonuclease 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009647217.1 Unplaced Scaffold Reference ASM70802v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipoprotein metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: zinc finger protein ZPR1
Names
Zinc finger protein ZPR1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Charadrius vociferus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70802v2

Genomic

  1. NW_009647217.1 Reference ASM70802v2

    Range
    112193..124833
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009895931.1 → XP_009894233.1  LOW QUALITY PROTEIN: zinc finger protein ZPR1

    Conserved Domains (5) summary
    PHA02666
    Location:861 → 1036
    PHA02666; hypothetical protein; Provisional
    pfam01442
    Location:64 → 245
    Apolipoprotein; Apolipoprotein A1/A4/E domain
    pfam03367
    Location:537 → 695
    zf-ZPR1; ZPR1 zinc-finger domain
    pfam09736
    Location:1098 → 1239
    Bud13; Pre-mRNA-splicing factor of RES complex
    pfam15087
    Location:783 → 928
    DUF4551; Protein of unknown function (DUF4551)
Nucleotide Protein
Heading Accession and Version

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