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HAGH hydroxyacylglutathione hydrolase [ Charadrius vociferus (killdeer) ]

Gene ID: 104294946, updated on 3-Aug-2024

Summary

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Gene symbol
HAGH
Gene description
hydroxyacylglutathione hydrolase
Locus tag
N301_13363
Gene type
protein coding
RefSeq status
MODEL
Organism
Charadrius vociferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Charadriidae; Charadrius
Orthologs
human mouse all
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Genomic context

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See HAGH in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current ASM70802v2 (GCF_000708025.1) Unplaced Scaffold NW_009646404.1 (117657..129947, complement)

NW_009646404.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104295156 Neighboring gene cytosolic iron-sulfur assembly component 3 Neighboring gene fumarylacetoacetate hydrolase domain containing 1 Neighboring gene meiosis specific with OB-fold

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009646404.1 Unplaced Scaffold Reference ASM70802v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydroxyacylglutathione hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hydroxyacylglutathione hydrolase, mitochondrial
Names
Hydroxyacylglutathione hydrolase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Charadrius vociferus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70802v2

Genomic

  1. NW_009646404.1 Reference ASM70802v2

    Range
    117657..129947 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009894643.1 → XP_009892945.1  hydroxyacylglutathione hydrolase, mitochondrial

    UniProtKB/TrEMBL
    A0A099ZWA5
    Conserved Domains (3) summary
    PLN02469
    Location:1 → 256
    PLN02469; hydroxyacylglutathione hydrolase
    pfam16123
    Location:174 → 254
    HAGH_C; Hydroxyacylglutathione hydrolase C-terminus
    cd07723
    Location:6 → 173
    hydroxyacylglutathione_hydrolase_MBL-fold; hydroxyacylglutathione hydrolase, MBL-fold metallo-hydrolase domain
Nucleotide Protein
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