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DPY19L3 dpy-19 like C-mannosyltransferase 3 [ Charadrius vociferus (killdeer) ]

Gene ID: 104294442, updated on 3-Aug-2024

Summary

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Gene symbol
DPY19L3
Gene description
dpy-19 like C-mannosyltransferase 3
Locus tag
N301_08688
Gene type
protein coding
RefSeq status
MODEL
Organism
Charadrius vociferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Charadriidae; Charadrius
Orthologs
human mouse all
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Genomic context

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See DPY19L3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
100 current ASM70802v2 (GCF_000708025.1) Unplaced Scaffold NW_009646847.1 (1376582..1410537, complement)

NW_009646847.1Genomic Context describing neighboring genes Neighboring gene carbohydrate sulfotransferase 5-like Neighboring gene neural-cadherin-like Neighboring gene zinc finger protein 507 Neighboring gene teashirt zinc finger homeobox 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009646847.1 Unplaced Scaffold Reference ASM70802v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable C-mannosyltransferase DPY19L3
Names
dpy-19 like 3
putative C-mannosyltransferase DPY19L3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Charadrius vociferus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70802v2

Genomic

  1. NW_009646847.1 Reference ASM70802v2

    Range
    1376582..1410537 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009894055.1 → XP_009892357.1  probable C-mannosyltransferase DPY19L3

    See identical proteins and their annotated locations for XP_009892357.1

    UniProtKB/TrEMBL
    A0A099ZZT5
    Conserved Domains (1) summary
    pfam10034
    Location:57 → 711
    Dpy19; Q-cell neuroblast polarization
Nucleotide Protein
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