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ACSS2 acyl-CoA synthetase short chain family member 2 [ Charadrius vociferus (killdeer) ]

Gene ID: 104292676, updated on 3-Aug-2024

Summary

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Gene symbol
ACSS2
Gene description
acyl-CoA synthetase short chain family member 2
Locus tag
N301_10021
Gene type
protein coding
RefSeq status
MODEL
Organism
Charadrius vociferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Charadriidae; Charadrius
Orthologs
human mouse all
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Genomic context

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See ACSS2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
100 current ASM70802v2 (GCF_000708025.1) Unplaced Scaffold NW_009650082.1 (200316..232138)

NW_009650082.1Genomic Context describing neighboring genes Neighboring gene microtubule crosslinking factor 2 Neighboring gene glutathione synthetase Neighboring gene myosin heavy chain 7B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009650082.1 Unplaced Scaffold Reference ASM70802v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables AMP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables acetate-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acetyl-CoA biosynthetic process from acetate IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acetyl-coenzyme A synthetase, cytoplasmic
Names
Acetyl-coenzyme A synthetase, cytoplasmic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Charadrius vociferus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70802v2

Genomic

  1. NW_009650082.1 Reference ASM70802v2

    Range
    200316..232138
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009892089.1 → XP_009890391.1  acetyl-coenzyme A synthetase, cytoplasmic isoform X1

    UniProtKB/TrEMBL
    A0A0A0AY92
    Conserved Domains (2) summary
    cd05966
    Location:1 → 603
    ACS; Acetyl-CoA synthetase (also known as acetate-CoA ligase and acetyl-activating enzyme)
    TIGR02188
    Location:2 → 610
    Ac_CoA_lig_AcsA; acetate--CoA ligase

  2. XM_009892090.1 → XP_009890392.1  acetyl-coenzyme A synthetase, cytoplasmic isoform X2

    UniProtKB/TrEMBL
    A0A0A0AY92
    Conserved Domains (2) summary
    cd05966
    Location:1 → 590
    ACS; Acetyl-CoA synthetase (also known as acetate-CoA ligase and acetyl-activating enzyme)
    TIGR02188
    Location:2 → 597
    Ac_CoA_lig_AcsA; acetate--CoA ligase
Nucleotide Protein
Heading Accession and Version

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