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ST8SIA2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [ Charadrius vociferus (killdeer) ]

Gene ID: 104288360, updated on 3-Aug-2024

Summary

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Gene symbol
ST8SIA2
Gene description
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2
Locus tag
N301_04423
Gene type
protein coding
RefSeq status
MODEL
Organism
Charadrius vociferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Charadriidae; Charadrius
Orthologs
human mouse all
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Genomic context

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See ST8SIA2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current ASM70802v2 (GCF_000708025.1) Unplaced Scaffold NW_009646608.1 (5413395..5432477, complement)

NW_009646608.1Genomic Context describing neighboring genes Neighboring gene repulsive guidance molecule BMP co-receptor a Neighboring gene chromodomain helicase DNA binding protein 2 Neighboring gene solute carrier organic anion transporter family member 3A1 Neighboring gene synaptic vesicle glycoprotein 2B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009646608.1 Unplaced Scaffold Reference ASM70802v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: alpha-2,8-sialyltransferase 8B
Names
Alpha-2,8-sialyltransferase 8B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Charadrius vociferus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70802v2

Genomic

  1. NW_009646608.1 Reference ASM70802v2

    Range
    5413395..5432477 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009887159.1 → XP_009885461.1  LOW QUALITY PROTEIN: alpha-2,8-sialyltransferase 8B

    Conserved Domains (1) summary
    pfam00777
    Location:90 → 349
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
Heading Accession and Version

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