U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 [ Charadrius vociferus (killdeer) ]

Gene ID: 104286230, updated on 3-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
PRKAA2
Gene description
protein kinase AMP-activated catalytic subunit alpha 2
Locus tag
N301_03246
Gene type
protein coding
RefSeq status
MODEL
Organism
Charadrius vociferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Charadriidae; Charadrius
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PRKAA2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ASM70802v2 (GCF_000708025.1) Unplaced Scaffold NW_009648332.1 (1121561..1161565, complement)

NW_009648332.1Genomic Context describing neighboring genes Neighboring gene complement C8 beta chain Neighboring gene complement C8 alpha chain Neighboring gene phospholipid phosphatase 3 Neighboring gene ubiquitin specific peptidase 24 Neighboring gene transfer RNA glycine (anticodon CCC) Neighboring gene proprotein convertase subtilisin/kexin type 9

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_009648332.1 Unplaced Scaffold Reference ASM70802v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables AMP-activated protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
5'-AMP-activated protein kinase catalytic subunit alpha-2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Charadrius vociferus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70802v2

Genomic

  1. NW_009648332.1 Reference ASM70802v2

    Range
    1121561..1161565 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009884808.1 → XP_009883110.1  5'-AMP-activated protein kinase catalytic subunit alpha-2

    UniProtKB/TrEMBL
    A0A0A0AG54
    Conserved Domains (4) summary
    cd12200
    Location:376 → 531
    AMPKA2_C; C-terminal regulatory domain of 5'-AMP-activated serine/threonine kinase, subunit alpha
    smart00220
    Location:14 → 249
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd14404
    Location:266 → 330
    UBA_AID_AAPK2; UBA-like autoinhibitory domain (AID) found in vertebrate 5'-AMP-activated protein kinase catalytic subunit alpha-2 (AMPKalpha-2)
    cd14079
    Location:13 → 249
    STKc_AMPK_alpha; Catalytic domain of the Alpha subunit of the Serine/Threonine Kinase, AMP-activated protein kinase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.