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ATP6AP1 ATPase H+ transporting accessory protein 1 [ Charadrius vociferus (killdeer) ]

Gene ID: 104285240, updated on 3-Aug-2024

Summary

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Gene symbol
ATP6AP1
Gene description
ATPase H+ transporting accessory protein 1
Locus tag
N301_10446
Gene type
protein coding
RefSeq status
MODEL
Organism
Charadrius vociferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Charadriidae; Charadrius
Orthologs
human mouse all
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Genomic context

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See ATP6AP1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ASM70802v2 (GCF_000708025.1) Unplaced Scaffold NW_009648043.1 (5109910..5165425)

NW_009648043.1Genomic Context describing neighboring genes Neighboring gene NADH:ubiquinone oxidoreductase subunit A5 Neighboring gene IQ motif and ubiquitin domain containing Neighboring gene solute carrier family 13 member 1 Neighboring gene calcium dependent secretion activator 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009648043.1 Unplaced Scaffold Reference ASM70802v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of cellular pH IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of proton-transporting V-type ATPase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
V-type proton ATPase subunit S1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Charadrius vociferus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70802v2

Genomic

  1. NW_009648043.1 Reference ASM70802v2

    Range
    5109910..5165425
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009883667.1 → XP_009881969.1  V-type proton ATPase subunit S1

    UniProtKB/TrEMBL
    A0A0A0ACA9
    Conserved Domains (1) summary
    pfam01299
    Location:241 → 432
    Lamp; Lysosome-associated membrane glycoprotein (Lamp)
Nucleotide Protein
Heading Accession and Version

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