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SUCLG2 succinate-CoA ligase GDP-forming subunit beta [ Charadrius vociferus (killdeer) ]

Gene ID: 104285194, updated on 3-Aug-2024

Summary

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Gene symbol
SUCLG2
Gene description
succinate-CoA ligase GDP-forming subunit beta
Locus tag
N301_08162
Gene type
protein coding
RefSeq status
MODEL
Organism
Charadrius vociferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Charadriidae; Charadrius
Orthologs
human mouse all
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Genomic context

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See SUCLG2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ASM70802v2 (GCF_000708025.1) Unplaced Scaffold NW_009648041.1 (2896501..3128440)

NW_009648041.1Genomic Context describing neighboring genes Neighboring gene TAFA chemokine like family member 4 Neighboring gene TAFA chemokine like family member 1 Neighboring gene monocarboxylate transporter 2-like Neighboring gene kelch repeat and BTB domain containing 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009648041.1 Unplaced Scaffold Reference ASM70802v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables succinate-CoA ligase (GDP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in succinyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of succinate-CoA ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
Names
succinate-CoA ligase GDP-forming beta subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Charadrius vociferus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70802v2

Genomic

  1. NW_009648041.1 Reference ASM70802v2

    Range
    2896501..3128440
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009883621.1 → XP_009881923.1  succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial

    UniProtKB/TrEMBL
    A0A0A0ADY0
    Conserved Domains (3) summary
    PRK00696
    Location:93 → 474
    sucC; succinyl-CoA synthetase subunit beta; Provisional
    pfam00549
    Location:360 → 474
    Ligase_CoA; CoA-ligase
    pfam08442
    Location:93 → 301
    ATP-grasp_2; ATP-grasp domain
Nucleotide Protein
Heading Accession and Version

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