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SLC35F1 solute carrier family 35 member F1 [ Charadrius vociferus (killdeer) ]

Gene ID: 104284917, updated on 3-Aug-2024

Summary

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Gene symbol
SLC35F1
Gene description
solute carrier family 35 member F1
Locus tag
N301_05541
Gene type
protein coding
RefSeq status
MODEL
Organism
Charadrius vociferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Charadriidae; Charadrius
Orthologs
human mouse all
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Genomic context

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See SLC35F1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current ASM70802v2 (GCF_000708025.1) Unplaced Scaffold NW_009646500.1 (2884239..2993054, complement)

NW_009646500.1Genomic Context describing neighboring genes Neighboring gene minichromosome maintenance 9 homologous recombination repair factor Neighboring gene anti-silencing function 1A histone chaperone Neighboring gene centrosomal protein 85 like Neighboring gene phospholamban Neighboring gene carboxypeptidase N subunit 2-like Neighboring gene NUS1 dehydrodolichyl diphosphate synthase subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009646500.1 Unplaced Scaffold Reference ASM70802v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
solute carrier family 35 member F1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Charadrius vociferus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70802v2

Genomic

  1. NW_009646500.1 Reference ASM70802v2

    Range
    2884239..2993054 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009883301.1 → XP_009881603.1  solute carrier family 35 member F1

    UniProtKB/TrEMBL
    A0A099ZYY2
    Conserved Domains (3) summary
    pfam00892
    Location:168 → 305
    EamA; EamA-like transporter family
    pfam06027
    Location:7 → 306
    SLC35F; Solute carrier family 35
    cl23754
    Location:81 → 218
    EamA; EamA-like transporter family
Nucleotide Protein
Heading Accession and Version

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