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LCLAT1 lysocardiolipin acyltransferase 1 [ Charadrius vociferus (killdeer) ]

Gene ID: 104283656, updated on 3-Aug-2024

Summary

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Gene symbol
LCLAT1
Gene description
lysocardiolipin acyltransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Charadrius vociferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Charadriidae; Charadrius
Orthologs
human mouse all
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Genomic context

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See LCLAT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current ASM70802v2 (GCF_000708025.1) Unplaced Scaffold NW_009646437.1 (918436..995184, complement)

NW_009646437.1Genomic Context describing neighboring genes Neighboring gene polypeptide N-acetylgalactosaminyltransferase 14 Neighboring gene calpain 13 Neighboring gene LBH regulator of WNT signaling pathway Neighboring gene yippee like 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009646437.1 Unplaced Scaffold Reference ASM70802v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysocardiolipin acyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Charadrius vociferus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70802v2

Genomic

  1. NW_009646437.1 Reference ASM70802v2

    Range
    918436..995184 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009881867.1 → XP_009880169.1  lysocardiolipin acyltransferase 1

    See identical proteins and their annotated locations for XP_009880169.1

    UniProtKB/TrEMBL
    A0A099ZVD7
    Conserved Domains (3) summary
    cd07990
    Location:55 → 248
    LPLAT_LCLAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like
    PRK14014
    Location:5 → 277
    PRK14014; putative acyltransferase; Provisional
    pfam16076
    Location:234 → 306
    Acyltransf_C; Acyltransferase C-terminus
Nucleotide Protein
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