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ASAH2 N-acylsphingosine amidohydrolase 2 [ Charadrius vociferus (killdeer) ]

Gene ID: 104283473, updated on 3-Aug-2024

Summary

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Gene symbol
ASAH2
Gene description
N-acylsphingosine amidohydrolase 2
Locus tag
N301_09749
Gene type
protein coding
RefSeq status
MODEL
Organism
Charadrius vociferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Charadriidae; Charadrius
Orthologs
human mouse all
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Genomic context

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See ASAH2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
100 current ASM70802v2 (GCF_000708025.1) Unplaced Scaffold NW_009646433.1 (1233163..1253967, complement)

NW_009646433.1Genomic Context describing neighboring genes Neighboring gene protein kinase cGMP-dependent 1 Neighboring gene APOBEC1 complementation factor Neighboring gene sphingomyelin synthase 1 Neighboring gene multiple inositol-polyphosphate phosphatase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009646433.1 Unplaced Scaffold Reference ASM70802v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acylsphingosine amidohydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingosine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neutral ceramidase
Names
Neutral ceramidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Charadrius vociferus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70802v2

Genomic

  1. NW_009646433.1 Reference ASM70802v2

    Range
    1233163..1253967 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009881648.1 → XP_009879950.1  neutral ceramidase

    UniProtKB/TrEMBL
    A0A099ZZK1
    Conserved Domains (3) summary
    PTZ00487
    Location:9 → 733
    PTZ00487; ceramidase; Provisional
    pfam04734
    Location:55 → 561
    Ceramidase_alk; Neutral/alkaline non-lysosomal ceramidase, N-terminal
    pfam17048
    Location:563 → 733
    Ceramidse_alk_C; Neutral/alkaline non-lysosomal ceramidase, C-terminal
Nucleotide Protein
Heading Accession and Version

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