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SDHB succinate dehydrogenase complex iron sulfur subunit B [ Charadrius vociferus (killdeer) ]

Gene ID: 104282018, updated on 3-Aug-2024

Summary

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Gene symbol
SDHB
Gene description
succinate dehydrogenase complex iron sulfur subunit B
Locus tag
N301_02970
Gene type
protein coding
RefSeq status
MODEL
Organism
Charadrius vociferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Charadriidae; Charadrius
Orthologs
human mouse all
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Genomic context

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See SDHB in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ASM70802v2 (GCF_000708025.1) Unplaced Scaffold NW_009647338.1 (37666..47771, complement)

NW_009647338.1Genomic Context describing neighboring genes Neighboring gene ATPase cation transporting 13A2 Neighboring gene peptidyl arginine deiminase 2 Neighboring gene peptidyl arginine deiminase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009647338.1 Unplaced Scaffold Reference ASM70802v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables electron transfer activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron-sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in aerobic respiration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in respiratory electron transport chain IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Charadrius vociferus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70802v2

Genomic

  1. NW_009647338.1 Reference ASM70802v2

    Range
    37666..47771 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009880085.1 → XP_009878387.1  succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial

    UniProtKB/TrEMBL
    A0A0A0A6Y8
    Conserved Domains (3) summary
    PRK05950
    Location:19 → 250
    sdhB; succinate dehydrogenase iron-sulfur subunit; Reviewed
    pfam13085
    Location:19 → 125
    Fer2_3; 2Fe-2S iron-sulfur cluster binding domain
    pfam13534
    Location:163 → 236
    Fer4_17; 4Fe-4S dicluster domain
Nucleotide Protein
Heading Accession and Version

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