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LOC104281962 heparan sulfate glucosamine 3-O-sulfotransferase 3B1-like [ Charadrius vociferus (killdeer) ]

Gene ID: 104281962, updated on 3-Aug-2024

Summary

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Gene symbol
LOC104281962
Gene description
heparan sulfate glucosamine 3-O-sulfotransferase 3B1-like
Locus tag
N301_12259
Gene type
protein coding
RefSeq status
MODEL
Organism
Charadrius vociferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Charadriidae; Charadrius
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Genomic context

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See LOC104281962 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current ASM70802v2 (GCF_000708025.1) Unplaced Scaffold NW_009647271.1 (1579627..1581174)

NW_009647271.1Genomic Context describing neighboring genes Neighboring gene heparan sulfate glucosamine 3-O-sulfotransferase 3B1 Neighboring gene protoheme IX farnesyltransferase, mitochondrial Neighboring gene meteorin like, glial cell differentiation regulator Neighboring gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009647271.1 Unplaced Scaffold Reference ASM70802v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 3B1-like
Names
Heparan sulfate glucosamine 3-O-sulfotransferase 3A1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Charadrius vociferus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70802v2

Genomic

  1. NW_009647271.1 Reference ASM70802v2

    Range
    1579627..1581174
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009880027.1 → XP_009878329.1  heparan sulfate glucosamine 3-O-sulfotransferase 3B1-like

    UniProtKB/TrEMBL
    A0A0A0A3J7
    Conserved Domains (1) summary
    pfam00685
    Location:33 → 197
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

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